a quasi-exclusive european ancestry in the senepol tropical cattle breed highlights the importance of the slick locus in tropical adaptationsenepol quasi-exclusive欧洲血统的热带牛品种突出的重要性在热带适应光滑的轨迹.pdfVIP

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a quasi-exclusive european ancestry in the senepol tropical cattle breed highlights the importance of the slick locus in tropical adaptationsenepol quasi-exclusive欧洲血统的热带牛品种突出的重要性在热带适应光滑的轨迹.pdf

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a quasi-exclusive european ancestry in the senepol tropical cattle breed highlights the importance of the slick locus in tropical adaptationsenepol quasi-exclusive欧洲血统的热带牛品种突出的重要性在热带适应光滑的轨迹

A Quasi-Exclusive European Ancestry in the Senepol Tropical Cattle Breed Highlights the Importance of the slick Locus in Tropical Adaptation 1,2 3 2 2 3 Laurence Flori *, Mary Isabel Gonzatti , Sophie Thevenon , Isabelle Chantal , Joar Pinto , 2 3 4 David Berthier , Pedro M. Aso , Mathieu Gautier ´ ´ ´ 1 INRA, UMR 1313 GABI, F-78350 Jouy-en-Josas, France, 2 CIRAD, UMR INTERTRYP, Montpellier, France, 3 Departamento de Biologıa Celular, Universidad Simon Bolıvar, Caracas, Venezuela, 4 INRA, UMR CBGP, Montferrier-sur-Lez, France Abstract Background: The Senepol cattle breed (SEN) was created in the early XXth century from a presumed cross between a European (EUT) breed (Red Poll) and a West African taurine (AFT) breed (N’Dama). Well adapted to tropical conditions, it is also believed trypanotolerant according to its putative AFT ancestry. However, such origins needed to be verified to define relevant husbandry practices and the genetic background underlying such adaptation needed to be characterized. Methodology/Principal Findings: We genotyped 153 SEN individuals on 47,365 SNPs and combined the resulting data with those available on 18 other populations representative of EUT, AFT and Zebu (ZEB) cattle. We found on average 89% EUT, 10.4% ZEB and 0.6% AFT ancestries in the SEN genome. We further looked for footprints of recent selection using standard tests based on the extent of haplotype homozygosity. We underlined i) three footprints on chromosome (BTA) 01, two of which are withi