Combining Genotype Improvement and Statistical Media Optimization for Isoprenoid Production in E. coli.docVIP
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Combining Genotype Improvement and Statistical Media Optimization for Isoprenoid Production in E. coli
CombiningGenotypeImprovementandStatisticalMedia
OptimizationforIsoprenoidProductioninE.coli
CongqiangZhang1,XixianChen1,RuiyangZou1,KangZhou1,GregoryStephanopoulos1,3 ,Heng-
PhonToo1,2
*
1ChemicalandPharmaceuticalEngineering,Singapore-MITAlliance,Singapore,Singapore,2DepartmentofBiochemistry,NationalUniversityofSingapore,Singapore,
Singapore,3DepartmentofChemicalEngineering,MassachusettsInstituteofTechnology,Cambridge,Massachusetts,UnitedStatesofAmerica
Abstract
Isoprenoids arealargeanddiverse class ofcompounds that includesmanyhigh valuenaturalproducts andarethusin
greatdemand.Tomeettheincreasingdemandforisoprenoidcompounds,metabolicengineeringofmicrobeshasbeen
used to produce isoprenoids in an economical and sustainable manner. To achieve high isoprenoid yields using this
technology,theavailabilityofmetabolicprecursorsfeedingthedeoxyxylulosephosphate(DXP)pathway,responsiblefor
isoprenoid biosynthesis, has to be optimized. In this study, phosphoenolpyruvate, a vital DXP pathway precursor, was
enriched by deleting the genes encoding the carbohydrate phosphotransferase system (PTS) in E. coli. Production of
lycopene(aC40isoprenoid)wasmaximizedbyoptimizinggrowthmediumandcultureconditions.Inoptimizedconditions,
thelycopeneyieldfromPTSmutantwassevenfoldhigherthanthatobtainedfromthewildtypestrain.Thisresultedinthe
highestreportedspecificyieldoflycopeneproducedfromtheDXPpathwayinE.colitodate(20,000mg/gdrycellweight).
Both the copy number of the plasmid encoding the lycopene biosynthetic genes and the expression were found to be
increased in the optimized media. Deletion of PTS together with a similar optimization strategy was also successful in
enhancing the production of amorpha-1,4-diene, a distinct C15 isoprenoid, suggesting that the approaches developed
hereincanbegenerallyappliedtooptimizeproductionofotherisoprenoids.
Citation:ZhangC,ChenX,ZouR,ZhouK,StephanopoulosG,etal.(2013)CombiningGenotypeImprovementandStatisticalMediaOptimizationforIsoprenoid
ProductioninE
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