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R E V I E W S
NETWORK DYNAMICS AND CELL
PHYSIOLOGY
John J. Tyson*, Kathy Chen* and Bela Novak‡
Complex assemblies of interacting proteins carry out most of the interesting jobs in a cell,
such as metabolism, DNA synthesis, movement and information processing. These
physiological properties play out as a subtle molecular dance, choreographed by underlying
regulatory networks. To understand this dance, a new breed of theoretical molecular
biologists reproduces these networks in computers and in the mathematical language of
dynamical systems.
M I L E S TO N E S The ultimate goal of molecular cell biology is to under- Sophisticated methods, based on quantum mechanics,
stand the physiology of living cells in terms of the infor- statistical mechanics and electrostatics, have been used
mation that is encoded in the genome of the cell. to understand diverse protein-mediated processes, such
as photosynthetic light absorption5 6
Everyone is aware of the broad outline of this enterprise , ATP synthesis and
(FIG. 1) — nucleotide sequences are translated into ion transport7.
amino-acid sequences, and the linear sequence of Even if we could predict the physicochemical prop-
amino acids directs
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