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Supplemental text Materials and methods. ChIP-sequencing. ChIP and ChIP-seq experiments were performed according to standard protocols as previously described (Delacroix et al., 2010; Kobi et al. 2010). Briefly ChIP-seq was performed using an Illumina GAIIx sequencer and the raw data analysed by the Illumina Eland pipeline V1.6. Peak detection was performed using the MACS software (/MACS/) (Zhang et al., 2008) under settings where where the HA-ChIP from untagged 501Mel cells was used as a negative control. Peaks were then annotated using GPAT (Krebs et al., 2008), http://bips.u-strasbg.fr/GPAT