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Genetic discovery for oil production and quality.pdf

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Genetic discovery for oil production and quality

ARTICLE Received 28 May 2015 | Accepted 10 Sep 2015 | Published 19 Oct 2015 Genetic discovery for oil production and quality in sesame Xin Wei1,*, Kunyan Liu2,*, Yanxin Zhang1,*, Qi Feng2,*, Linhai Wang1,*, Yan Zhao2, Donghua Li1, Qiang Zhao2, Xiaodong Zhu1, Xiaofeng Zhu1, Wenjun Li2, Danlin Fan2, Yuan Gao1, Yiqi Lu2, Xianmei Zhang3, Xiumei Tang4, Congcong Zhou2, Chuanrang Zhu2, Lifeng Liu3, Ruichun Zhong4, Qilin Tian2, Ziruo Wen2, Qijun Weng2, Bin Han2, Xuehui Huang2 Xiurong Zhang1 Oilseed crops are used to produce vegetable oil. Sesame (Sesamum indicum), an oilseed crop grown worldwide, has high oil content and a small diploid genome, but the genetic basis of oil production and quality is unclear. Here we sequence 705 diverse sesame varieties to construct a haplotype map of the sesame genome and de novo assemble two representative varieties to identify sequence variations. We investigate 56 agronomic traits in four environments and identify 549 associated loci. Examination of the major loci identifies 46 candidate causative genes, including genes related to oil content, fatty acid biosynthesis and yield. Several of the candidate genes for oil content encode enzymes involved in oil metabolism. Two major genes associated with lignification and black pigmentation in the seed coat are also associated with large variation in oil content. These findings may inform breeding and improvement strategies for a broad range of oilseed crops. DOI: 10.1038/ncomms9609 OPEN 1 Key Laboratory of Biology and Genetic Improvement of Oil Crops, Ministry of Agriculture of People’s Republic of China, Oilcrops Research Institute, Chinese Academy of Agricultural Sciences, Wuhan 430062, China. 2 National Center for Gene Research, Collaborative Innovation Center for Genetics and Development, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 500 Caobao Road, Shanghai 200233, China. 3 Luohe Academy of Agricultural Sciences, Luo