ProteinStructureandVisualization.PDFVIP

Protein Structure and Visualization In this practical you will learn how to • Search the Protein Structure Databank for information. • Critically choose the best structure, when more than one is available. • Visualize a protein structure and highlight features of interest. You will work with the protein Rhamnogalacturonan acetylesterase (RGAE) from Aspergillus aculeatus. It is one of several enzymes, which is used to degrade the plant cell wall, when the fungus “attacks” a plant. First, we will find the sequence of the protein, an