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a realistic assessment of methods for extracting geneprotein interactions from free text一个现实的评估方法从自由文本中提取geneprotein交互
BMC Bioinformatics BioMed Central
Research article Open Access
A realistic assessment of methods for extracting gene/protein
interactions from free text
1 2 1
Renata Kabiljo* , Andrew B Clegg and Adrian J Shepherd
Address: 1School of Crystallography and Institute of Structural and Molecular Biology, Birkbeck College, University of London, Malet Street,
London WC1E 7HX UK and 2Research Department of Structural and Molecular Biology and Institute of Structural and Molecular Biology,
University College London, Gower St, London, WC1E 6BT UK
Email: Renata Kabiljo* - r.kabiljo@mail.cryst.bbk.ac.uk; Andrew B Clegg - andrew.clegg@;
Adrian J Shepherd - a.shepherd@mail.cryst.bbk.ac.uk
* Corresponding author
Published: 28 July 2009 Received: 4 February 2009
Accepted: 28 July 2009
BMC Bioinformatics 2009, 10:233 doi:10.1186/1471-2105-10-233
This article is available from: /1471-2105/10/233
© 2009 Kabiljo et al; licensee BioMed Central Ltd.
This is an Open Access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0),
which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Abstract
Background: The automated extraction of gene and/or protein interactions from the literature
is one of the most important targets of biomedical text mining research. In this paper we present
a realistic evaluation of gene/protein interaction
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