A Gene Regulatory Network Model for Floral Transition of the Shoot Apex in Maize and Its Dynamic Modeling 英文参考文献.docVIP

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A Gene Regulatory Network Model for Floral Transition of the Shoot Apex in Maize and Its Dynamic Modeling 英文参考文献.doc

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A Gene Regulatory Network Model for Floral Transition of the Shoot Apex in Maize and Its Dynamic Modeling 英文参考文献

AGeneRegulatoryNetworkModelforFloralTransition oftheShootApexinMaizeandItsDynamicModeling ZhanshanDong*,OlgaDanilevskaya,TabareAbadie,CarlosMessina,NathanColes,MarkCooper DuPontPioneer,Johnston,Iowa,UnitedStatesofAmerica Abstract The transition from the vegetative to reproductive development is a critical event in the plant life cycle. The accurate predictionoffloweringtimeinelitegermplasmisimportantfordecisionsinmaizebreedingprogramsandbestagronomic practices. The understanding of the genetic control of flowering time in maize has significantly advanced in the past decade. Through comparative genomics, mutant analysis, genetic analysis and QTL cloning, and transgenic approaches, morethan30floweringtimecandidategenesinmaizehavebeenrevealedandtherelationshipsamongthesegeneshave beenpartiallyuncovered.Basedontheknowledgeofthefloweringtimecandidategenes,aconceptualgeneregulatory network model for the genetic control of flowering time in maize is proposed. To demonstrate the potential of the proposedgeneregulatorynetworkmodel,afirstattemptwasmadetodevelopadynamicgenenetworkmodeltopredict floweringtimeofmaizegenotypesvaryingforspecificgenes.Thedynamicgenenetworkmodeliscomposedoffourgenes andwasbuiltonthebasisofgeneexpressiondynamicsofthetwolatefloweringid1anddlf1mutants,theearlyflowering landraceGaspeFlintandthetemperateinbredB73.Themodelwasevaluatedagainstthephenotypicdataoftheid1dlf1 double mutant and the ZMM4 overexpressed transgenic lines. The model provides a working example that leverages knowledgefrommodelorganismsfortheutilizationofmaizegenomicinformationtopredictawholeplanttraitphenotype, floweringtime,ofmaizegenotypes. Citation:DongZ,DanilevskayaO,AbadieT,MessinaC,ColesN,etal.(2012)AGeneRegulatoryNetworkModelforFloralTransitionoftheShootApexinMaize andItsDynamicModeling.PLoSONE7(8):e43450.doi:10.1371/journal.pone.0043450 Editor:FrankG.Harmon,USDA-ARS,UnitedStatesofAmerica ReceivedDecember27,2011;AcceptedJuly20,2012;PublishedAugust17,2012 Copyright: ? 2012 Don