A Snapshot of Histone Modifications within Transposable Elements in Drosophila Wild Type Strains 英文参考文献.docVIP

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A Snapshot of Histone Modifications within Transposable Elements in Drosophila Wild Type Strains 英文参考文献.doc

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A Snapshot of Histone Modifications within Transposable Elements in Drosophila Wild Type Strains 英文参考文献

ASnapshotofHistoneModificationswithin TransposableElementsinDrosophilaWildTypeStrains RitaRebollo1¤a,Be′atriceHorard2¤b,FloraBegeot3,MarionDelattre3,EricGilson2,CristinaVieira1* 1LaboratoiredeBiome′trieetBiologieEvolutive,UMR5558,CNRS,Universite′deLyon,Universite′Lyon1,Villeurbanne,France,2InstituteofResearchonCancerandAging, CNRSUMR7284/INSERMU1081/UNSFaculte′ deMe′decine,Nice,France,3De′partementdeGe′ne′tiqueetEvolution,Universite′ deGene`ve,Gene`ve,Switzerland Abstract Transposable elements (TEs) are a major source of genetic variability in genomes, creating genetic novelty and driving genomeevolution.AnalysisofsequencedgenomeshasrevealedconsiderablediversityinTEfamilies,copynumber,and localizationbetweendifferent,closelyrelatedspecies.Forinstance,althoughthetwinspeciesDrosophilamelanogasterand D.simulanssharethesameTEfamilies,theydisplaydifferentamountsofTEs.Furthermore,previousanalysesofwildtype derived strains of D. simulans have revealed high polymorphism regarding TE copy number within this species. Several factorsmayinfluencethediversityandabundanceofTEsinagenome,includingmolecularmechanismssuchasepigenetic factors,whichcouldbeasourceofvariationinTEsuccess.Inthispaper,wepresentthefirstanalysisoftheepigeneticstatus offourTEfamilies(roo,tirant,412andF)insevenwildtypestrainsofD.melanogasterandD.simulans.Ourdatashowsintra- andinter-specificvariationsinthehistonemarksthatadornTEcopies.Ourresultsdemonstratethatthechromatinstateof commonTEsvariesamongTEfamilies,betweencloselyrelatedspeciesandalsobetweenwildtypestrains. Citation:RebolloR,HorardB,BegeotF,DelattreM,GilsonE,etal.(2012)ASnapshotofHistoneModificationswithinTransposableElementsinDrosophilaWild TypeStrains.PLoSONE7(9):e44253.doi:10.1371/journal.pone.0044253 Editor:NadiaSingh,NorthCarolinaStateUniversity,UnitedStatesofAmerica ReceivedApril11,2012;AcceptedJuly31,2012;PublishedSeptember4,2012 Copyright: ? 2012 Rebollo et al. This is an open-access article distributed under the terms of the Creative