A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples.docVIP

Dolliveetal.GenomeBiology2012,13:R60 /2012/13/7/R60 METHOD OpenAccess AtoolkitforquantifyingeukaryoticrRNAgene sequencesfromhumanmicrobiomesamples SerenaDollive1,GregoryLPeterfreund1,ScottSherrill-Mix1,KyleBittinger1,RohiniSinha1,ChristianHoffmann1, ChristopherSNabel1,DavidAHill1,2,3,DavidArtis1,2,3,MichaelABachman4,5,RebeccaCusters-Allen1, StephanieGrunberg1,GaryDWu6,JamesDLewis7andFredericDBushman1* Abstract Eukaryoticmicroorganismsareimportantbutunderstudiedcomponentsofthehumanmicrobiome.Herewe presentapipelineforanalysisofdeepsequencingdataonsinglecelleukaryotes.Wedesignedanew18SrRNA gen