EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta) Implications for the evolution of green plants (Viridiplantae).docVIP

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EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta) Implications for the evolution of green plants (Viridiplantae).doc

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EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta) Implications for the evolution of green plants (Viridiplantae)

BMC Plant Biology BioMedCentral Research article Open Access EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta): Implications for the evolution of green plants (Viridiplantae) Andreas Simon?1, Gernot Gl?ckner?2, Marius Felder2, Michael Melkonian1 and Burkhard Becker*1 Address: 1Botanical Institute, University of Cologne, Gyrhofstr. 15, 50931 Cologne, Germany and 2Genome Analysis, Leibniz Institute for Age Research – Fritz Lipmann Institute, Beutenbergstr. 11, 07745 Jena, Germany Email: Andreas Simon - andreas.simon@uni-koeln.de; Gernot Gl?ckner - gernot@imb-jena.de; Marius Felder - mfelder@imb-jena.de; Michael Melkonian - michael.melkonian@uni-koeln.de; Burkhard Becker* - b.becker@uni-koeln.de * Corresponding author ?Equal contributors Published: 13 February 2006 Received: 31 October 2005 Accepted: 13 February 2006 BMC Plant Biology2006, 6:2 doi:10.1186/1471-2229-6-2 This article is available from: /1471-2229/6/2 ? 2006Simon et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: The Viridiplantae (land plants and green algae) consist of two monophyletic lineages, the Chlorophyta and the Streptophyta. The Streptophyta include all embryophytes and a small but diverse group of freshwater algae traditionally known as the Charophyceae (e.g. Charales, Coleochaete and the Zygnematales). The only flagellate currently included in the Streptophyta is Mesostigma viride Lauterborn. To gain insight into the genome evolution in streptophytes, we have sequenced 10,395 ESTs from Mesostigma representing 3,300 independent contigs and compared the ESTs of Mesostigma with available plant genomes (Arabidopsis, Oryza, Chlamydomonas), with ESTs from the bryophyte Physcomit