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Journal of Machine Learning Research 16 (2015) 2611-2616 Submitted 2/14; Revised 12/14; Published 12/15
pyGPs – A Python Library for
Gaussian Process Regression and Classification
Marion Neumann m.neumann@
Department of Computer Science and Engineering,
Washington University, St. Louis, MO 63130, United States
Shan Huang schan.huang@
Fraunhofer IAIS, 53757 Sankt Augustin, Germany
Daniel E. Marthaler dan.marthaler@
Sproutling, San Francisco, CA 94111, United States
Kristian Kersting kristian.kersting@cs.tu-dortmund.de
Department of Computer Science, TU Dortmund University
44221 Dortmund, Germany
Editor: Antti Honkela
Abstract
We introduce pyGPs, an object-oriented implementation of Gaussian processes (gps) for
machine learning. The library provides a wide range of functionalities reaching from simple
gp specification via mean and covariance and gp inference to more complex implementa-
tions of hyperparameter optimization, sparse approximations, and graph based learning.
Using Python we focus on usability for both “users” and “researchers”. Our main goal is to
offer a user-friendly and flexible implementation of gps for machine learning.
Keywords: Gaussian processes, Python, regression and classification
1. Introduction
pyGPs is a Python software project implementing Gaussian processes (gps) for machine
learning (ml). gps have become a popular model for a wide variety of ml tasks (Rasmussen
and Williams, 2006), such as standard regression and classification, as well as active learning
(Freytag et al., 2013), graph-based and relational learning (Chu
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