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structural and functional map of a bacterial nucleoid细菌类核的结构性和功能性映射
Minireview
Structural and functional map of a bacterial nucleoid
† †
Agustino Martínez-Antonio*, Alejandra Medina-Rivera and Julio Collado-Vides
Addresses: *Departamento de Ingeniería Genética, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional,
Irapuato, 36500, México. †Programa de Genómica Computacional, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de
México, Cuernavaca, Morelos, México.
Correspondence: Julio Collado-Vides. Email: collado@ccg.unam.mx; Agustino Martínez-Antonio. Email: amartinez@ira.cinvestav.mx
nucleoid-associated proteins (NAPs) were proposed to be
Abstract
in charge of most chromosomal remodeling tasks. Among
Genome-wide mapping of transcription factor-DNA interactions
in bacterial chromosomes in vivo has begun to reveal global others, Ishihama and colleagues have studied NAPs
zones occupied by these factors that serve two purposes: extensively, and at the end of the 1990s, Ali Azam et al.
compacting the bacterial DNA and influencing global programs [9,10] found that in cultured cells, each NAP is maximally
of gene transcription. expressed during specific growth phases.
The regulatory regions of transcription units are located in
In single-celled organisms such as bacteria economy is noncoding DNA sequences where transcription factors and
critical, including the efficient use of space in the tiny cell. RNA polymerases bind to the
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