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基于PCR―DGGE分析云南牛干巴细菌群落结构
基于PCR―DGGE分析云南牛干巴细菌群落结构
摘 要:以黄牛后腿肉为原料,采用传统工艺加工云南牛干巴,分别在腌制前、腌制中期、腌制后期、成熟1 个月、成熟2 个月与成熟3 个月6 个加工阶段取样,应用聚合酶链式反应-变性梯度凝胶电泳(polymerase chain reaction-denaturing gradient gel electrophorsis,PCR-DGGE)技术分析不同加工阶段牛干巴的细菌群落结构及多样性差异。结果表明:牛干巴具有较为丰富的细菌多样性,同时存在明显的优势种群结构变化。腌制阶段的细菌种类最为丰富;腌制前与腌制后的样品中细菌群落结构差异明显,同一阶段细菌群落结构组成类似;存在于牛干巴加工过程中的细菌主要为葡萄球菌属(Staphylococcus)、嗜冷杆菌(Psychrobacter)及明串珠菌属(Leuconostoc)等,其中肠膜明串珠菌葡聚糖亚种(L.mesenteroides subsp. dextranicum)是优势菌种;此外,牛干巴加工过程中还存在着不可培养(unculturable bacterium)的菌群。
关键词:云南牛干巴;聚合酶链式反应-变性梯度凝胶电泳;细菌群落结构;多样性
Analysis of Bacterial Community Structure of Yunnan Dry-Cured Beef by Polymerase Chain
Reaction-Denaturing Gradient Gel Electrophorsis
LIU Shuyun1,2, SHNAG Siqi1,2, SUN Can1, WANG Guiying1,2, CHENG Zhibin2, XIAO Rong1, JIANG Jinxian1,
WANG Shanrong3,*, LIAO Guozhou2,*
(1.College of Food Science and Technology, Yunnan Agricultural University, Kunming 650201, China;
2.Livestock Product Processing Engineering and Technology Research Center of Yunnan Province, Kunming 650201, China;
3.Yunnan Rural Leader College, Yunnan Agricultural University, Kunming 650201, China)
Abstract: Yunnan dry-cured beef was processed from beef hindquarter using the traditional method. Six samples were collected before curing, during the mid- and late-curing stages, and after one, two and three months of fermentation and ripening, respectively and then the bacterial community structure and diversity in dry-cured beef at different processing stages were analyzed using polymerase chain reaction-denaturing gradient gel electrophorsis (PCR-DGGE). The results showed that dry-cured beef was relatively rich in bacterial diversity, and the dominant bacterial populations in it were highly diverse. The highest bacterial diversity was found during the curing process of meat; there was a significant difference in the bacterial community structure between cured and uncured meat. The bacterial community structure remained similar at the same stage of processi
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