QTLCartographer.pptVIP

QTL Cartographer A Program Package for finding Quantitative Trait Loci C. J. Basten Z.-B. Zeng and B. S. Weir Experimental Design Three Phases Phase I: Simulate or Reformat Data Phase II: Analyze Data Phase III: Visualize Results Data Preparation Simulate a genetic linkage map, genetic model and data set of marker and trait values Reformat a MAPMAKER data set Reformat your own data set Perform a bootstrap resampling Reformat MAPMAKER Data MAPMAKER *.raw file Create *.maps file with MAPMAKER Rmap reformats *.maps file Rcross reformats *.raw file Simulate Data Rmap creates a linkage