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COMP5318 Knowledge Discovery and Data Mining_2011 Semester 1_week7EM_dimred
Topics for the day
? Expectation Maximisation II
? Dimensionality Reduction
? PCA
? MDS
? Isomap
1
Announcements
? Marks for Assignment 1 will be available in 2 weeks.
? Assignment 2 will be available in web this week.
2
Expectation Maximisation (1)
3
? Probabilistic method for soft clustering.
? Direct method that assumes k clusters:{c1, c2,… ck}
? Soft version of k-means.
? Assumes a probabilistic model of categories that allows
computing p(z | x) for each category, z, for a given
example, x.
!#$%(()*$+)(,-)./0*
4
%(()*$1-2#,#-$3(/2/0*
Likelihood function
5
45)22$67089$7):#;)00
6
7
!#$%()*+,(-(.()*
? EM is an algorithm for finding MLE or MAP for
problems with hidden variables
? Key intuition: if we knew what cluster each point
belonged to (i.e., the z_i variables), we could
partition the data and find the MLE for each cluster
separately
? E step: infer responsibility of each cluster for each
data point
? M step: optimize parameters using “filled in” data z
? Repeat until convergence
!! ! #! ! $!!%#
Expectation Maximisation (2)
? Gaussian mixture model
? Mixing coefficients
? Maximise the log-likelihood
8
9.2. Mixtures of Gaussians 433
(a)
0 0.5 1
0
0.5
1 (b)
0 0.5 1
0
0.5
1 (c)
0 0.5 1
0
0.5
1
Figure 9.5 Example of 500 points drawn from the mixture of 3 Gaussians shown in Figure 2.23. (a) Samples
from the joint distribution p(z)p(x|z) in which the three states of z, corresponding to the three components of the
mixture, are depicted in red, green, and blue, and (b) the corresponding samples from the marginal distribution
p(x), which is obtained by simply ignoring the values of z and just plotting the x values. The data set in (a) is
said to be complete, whereas that in (b) is incomplete. (c) The same samples in which the colours represent the
value of the responsibilities γ(znk) associated with data point xn, obtained by plotting the corresponding point
using proportions of red, blue, and green ink given by γ(znk) for k = 1, 2, 3, respectively
matrix X in w
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