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DrugDesignFunctionalgroupsPharmacologicalActivity.ppt
Drug Design:
Functional groups / Pharmacological Activity;Structure - Mechanism of action;Structure - Mechanism of action;Active compound identified
Target?;Structure - Physiochemical properties
Acid / base properties
Water solubility
Partition coefficient
(Crystal structure)
Stereochemistry;Cyclopentolate - tertiary amine, pKa ca. 10 ;Antibacterial sulfonamides;Structure - Physiochemical properties
Acid / base properties
Water solubility
Partition coefficient
(Crystal structure)
Stereochemistry;The more H-bonds possible - the more water sol.;Prediction of water solubility - Empirical;Water solubilization of functional groups;logP ;Absorbtion of Bioactive Compounds;Most drugs: Passive diffusion;Crossing the membrane;Active transport / Carrier mediated transport
Less common
Structural recemblanse with for instance nutritional compound
Transport against conc. gradient
Mechanism saturated at high conc.
Competition for carrier molecules, compounds with structural resemblance;The Lipinski Rule of Five
states that compounds are likely to have good absorption and permeation
in biological systems and are more likely to be successful drug candidates
if they meet the following criteria:
five or fewer hydrogen-bond donors
ten (2 x 5) or fewer hydrogen-bond acceptors
molecular weight less than or equal to 500
calculated logP less than or equal to 5
*Compound classes that are substrates for biological transporters
are exceptions to the rule.;Biomolecules (reseptors, enzymes): Asymmetric;Restricted rotation - optically active rotamers;Screening/Design/Serendipity/Natural products
Lead compound
Structure Optimisation
Actual Drug;Antimycobacterials;Improvement of lead by functional group modification;Bioisosters:
Functional groups that results in approx. the same biological properties;Non-classical bioisosters
Not strong steric or electronic similarities
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