A Compact Statistical Model of the Song Syntax in Bengalese Finch 英文参考文献.docVIP

A Compact Statistical Model of the Song Syntax in Bengalese Finch 英文参考文献.doc

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A Compact Statistical Model of the Song Syntax in Bengalese Finch 英文参考文献

ACompactStatisticalModeloftheSongSyntaxin BengaleseFinch DezheZ.Jin*,AlexayA.Kozhevnikov DepartmentofPhysics,ThePennsylvaniaStateUniversity,UniversityPark,Pennsylvania,UnitedStatesofAmerica Abstract Songs of many songbird species consist of variable sequences of a finite number of syllables. A common approach for characterizingthesyntaxofthesecomplexsyllablesequencesistousetransitionprobabilitiesbetweenthesyllables.Thisis equivalent to the Markov model, in which each syllable is associated with one state, and the transition probabilities betweenthestatesdonotdependonthestatetransitionhistory.HereweanalyzethesongsyntaxinBengalesefinch.We showthattheMarkovmodelfailstocapturethestatisticalpropertiesofthesyllablesequences.Instead,astatetransition model that accurately describes the statistics of the syllable sequences includes adaptation of the self-transition probabilities when states are revisited consecutively, and allows associations of more than one state to agiven syllable. Such a model does not increase the model complexity significantly. Mathematically, the model is a partially observable Markovmodelwithadaptation(POMMA).ThesuccessofthePOMMAsupportsthebranchingchainnetworkmodelofhow syntaxiscontrolledwithinthepremotorsongnucleusHVC,butalsosuggeststhatadaptationandmany-to-onemapping fromthesyllable-encodingchainnetworksinHVCtosyllablesshouldbeincludedinthenetworkmodel. Citation: JinDZ,Kozhevnikov AA(2011)ACompact Statistical ModeloftheSongSyntaxinBengaleseFinch.PLoSComput Biol7(3):e1001108. doi:10.1371/ journal.pcbi.1001108 Editor:KarlJ.Friston,UniversityCollegeLondon,UnitedKingdom ReceivedSeptember8,2010;AcceptedFebruary10,2011;PublishedMarch17,2011 Copyright:?2011Jin,Kozhevnikov.Thisisanopen-accessarticledistributedunderthetermsoftheCreativeCommonsAttributionLicense,whichpermits unrestricteduse,distribution,andreproductioninanymedium,providedtheoriginalauthorandsourcearecredited. Funding:ThisresearchwassupportedbytheHuckInstituteofLifeScienceatthePenns

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