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Adaptive Temperature Compensation in Circadian Oscillations 英文参考文献
AdaptiveTemperatureCompensationinCircadian
Oscillations
PaulFranc?ois1*,NicolasDespierre1,2,EricD.Siggia3
1Ernest Rutherford Physics Building, McGill University, Montreal, Quebec, Canada, 2Ecole Polytechnique (member of ParisTech), Palaiseau, France, 3The Rockefeller
University,NewYork,NewYork,UnitedStatesofAmerica
Abstract
A temperature independent period and temperature entrainment are two defining features of circadian oscillators. A
defaultmodel of distributedtemperature compensation satisfies these basic facts yetis not easilyreconciled with other
propertiesofcircadianclocks,suchasmanymutantswithalteredbuttemperaturecompensatedperiods.Thedefaultmodel
alsosuggeststhattheshapeofthecircadianlimitcycleandtheassociatedphaseresponsecurves(PRC)willvarysincethe
averageconcentrationsofclockproteinschangewithtemperature.Weproposeanalternativeclassofmodelswherethe
twinpropertiesofafixedperiodandentrainmentarestructuralandarisefromanunderlyingadaptivesystemthatbuffers
temperaturechanges.ThesemodelsaredistinguishedbyaPRCwhoseshapeistemperatureindependentandorbitswhose
extremaaretemperatureindependent.Theyarereadilyevolvedbylocal,hillclimbing,optimizationofgenenetworksfora
commonqualitymeasureofbiologicalclocks,phaseanticipation.InterestinglyastandardrealizationoftheGoodwinmodel
fortemperaturecompensationdisplayspropertiesofadaptiveratherthandistributedtemperaturecompensation.
Citation:Franc?oisP,DespierreN,SiggiaED(2012)AdaptiveTemperatureCompensationinCircadianOscillations.PLoSComputBiol8(7):e1002585.doi:10.1371/
journal.pcbi.1002585
Editor:DavidRand,UniversityofWarwick,UnitedKingdom
ReceivedDecember21,2011;AcceptedMay2,2012;PublishedJuly12,2012
Copyright: ? 2012 Francois et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits
unrestricteduse,distribution,andreproductioninanymedium,providedtheoriginalauthorandsourcearecredited.
Funding:PFandNDweresupportedbyNaturalScienceandEngineeringResearchCouncilofC
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