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Galectin-3 and Beclin1Atg6 Genes In Human Cancers Using cDNA Tissue Panel, qRT-PCR, and Logistic Regression Model to Identify Cancer Cell Biomarkers 英文参考文献.docVIP

Galectin-3 and Beclin1Atg6 Genes In Human Cancers Using cDNA Tissue Panel, qRT-PCR, and Logistic Regression Model to Identify Cancer Cell Biomarkers 英文参考文献.doc

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Galectin-3 and Beclin1Atg6 Genes In Human Cancers Using cDNA Tissue Panel, qRT-PCR, and Logistic Regression Model to Identify Cancer Cell Biomarkers 英文参考文献

Galectin-3andBeclin1/Atg6GenesInHumanCancers: UsingcDNATissuePanel,qRT-PCR,andLogistic RegressionModeltoIdentifyCancerCellBiomarkers HallidayA.Idikio* DepartmentofLaboratoryMedicineandPathology,UniversityofAlberta,Edmonton,Alberta,Canada Abstract Background:Cancerbiomarkersaresoughttosupportcancerdiagnosis,predictcancerpatientresponsetotreatmentand survival. Identifying reliable biomarkers for predicting cancer treatment response needs understanding of all aspects of cancercelldeathandsurvival.Galectin-3andBeclin1areinvolvedintwocoordinatedpathwaysofprogrammedcelldeath, apoptosis and autophagy and are linked to necroptosis/necrosis. The aim of the study was to quantify galectin-3 and Beclin1mRNAinhumancancertissuecDNApanelsanddeterminetheirutilityasbiomarkersofcancercellsurvival. Methods and Results: A panel of 96 cDNAs from eight (8) different normal and cancer tissue types were used for quantitativereal-timepolymerasechainreaction(qRT-PCR)usingABI7900HT.Miner2.0,aweb-based4-and3-parameter logisticregressionsoftwarewasusedtoderiveindividualwellpolymerasechainreactionefficiencies(E)andcyclethreshold (Ct)values.MinersoftwarederivedformulawasusedtocalculatemRNAlevelsandthenfoldchanges.Theratiosofcancerto normal tissue levels of galectin-3 and Beclin1 were calculated (using the mean for each tissue type). Relative mRNA expressions for galectin-3 were higher than for Beclin1 in all tissue (normal and cancer) types. In cancer tissues, breast, kidney, thyroid and prostate had the highestgalectin-3 mRNA levels compared tonormal tissues. High levelsof Beclin1 mRNAlevelswereinliverandprostatecancerswhencomparedtonormaltissues.Breast,kidneyandthyroidcancershad highgalectin-3levelsandlowBeclin1levels. Conclusion:Galectin-3expressionpatternsinnormalandcancertissuessupportitsreportedrolesinhumancancer.Beclin1 expressionpatternsupportsitsrolesincancercellsurvivalandintreatmentresponse.qRT-PCRanalysismethodusedmay enable high throughput studies to generate molecular biomarker se

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