Polymorphisms in O-methyltransferase genes are associated with stover cell wall digestibility in European maize (Zea mays L.) 英文参考文献.docVIP

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Polymorphisms in O-methyltransferase genes are associated with stover cell wall digestibility in European maize (Zea mays L.) 英文参考文献.doc

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Polymorphisms in O-methyltransferase genes are associated with stover cell wall digestibility in European maize (Zea mays L.) 英文参考文献

Brenneretal.BMCPlantBiology2010,10:27 /1471-2229/10/27 RESEARCH ARTICLE OpenAccess PolymorphismsinO-methyltransferasegenesare associatedwithstovercellwalldigestibilityin Europeanmaize(ZeamaysL.) EvertonABrenner1,ImadZein2,YongshengChen1,JeppeRAndersen3,GerhardWenzel2,MilenaOuzunova4, JoachimEder5,BirteDarnhofer5,UschiFrei1,YvesBarrière6,ThomasLübberstedt1* Abstract Background:OMT(O-methyltransferase)genesareinvolvedinligninbiosynthesis,whichrelatestostovercellwall digestibility.Reducedlignincontentisanimportantdeterminantofbothforagequalityandethanolconversion efficiencyofmaizestover. Results:VariationingenomicsequencescodingforCOMT,CCoAOMT1,andCCoAOMT2wasanalyzedinrelationto stovercellwalldigestibilityforapanelof40Europeanforagemaizeinbredlines,andre-analyzedforapanelof34 linesfromapublishedFrenchstudy.Differentmethodologiesforassociationanalysiswereperformedand compared.Acrossassociationmethodologies,atotalnumberof25,12,1,6COMTpolymorphicsiteswere significantlyassociatedwithDNDF,OMD,NDF,andWSC,respectively.AssociationanalysisforCCoAOMT1and CCoAOMT2identifiedsubstantiallyfewerpolymorphicsites(3and2,respectively)associatedwiththeinvestigated traits.Ourre-analysisonthe34linesfromapublishedFrenchdatasetidentified14polymorphicsitessignificantly associatedwithcellwalldigestibility,twoofthemwereconsistentwithourstudy.Promisingpolymorphisms putativelycausallyassociatedwithvariabilityofcellwalldigestibilitywereinferredfromthetotalnumberof significantlyassociatedSNPs/Indels. Conclusions:SeveralpolymorphicsitesforthreeO-methyltransferaselociwereassociatedwithstovercellwall digestibility.AllthreetestedgenesseemtobeinvolvedincontrollingDNDF,inparticularCOMT.Thus,considerable variationamongBm3wildtypeallelescanbeexploitedforimprovingcell-walldigestibility.Targetsitesfor functionalmarkerswereidentifiedenablingdevelopmentofefficientmarker-basedselectionstrategies. Background procedures,enablingbetterethanolconversionefficiency Stover cell-wall digestibility haslongbeenshowntob