Polymorphisms in O-methyltransferase genes are associated with stover cell wall digestibility in European maize (Zea mays L.) 英文参考文献.docVIP
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Polymorphisms in O-methyltransferase genes are associated with stover cell wall digestibility in European maize (Zea mays L.) 英文参考文献
Brenneretal.BMCPlantBiology2010,10:27
/1471-2229/10/27
RESEARCH ARTICLE
OpenAccess
PolymorphismsinO-methyltransferasegenesare
associatedwithstovercellwalldigestibilityin
Europeanmaize(ZeamaysL.)
EvertonABrenner1,ImadZein2,YongshengChen1,JeppeRAndersen3,GerhardWenzel2,MilenaOuzunova4,
JoachimEder5,BirteDarnhofer5,UschiFrei1,YvesBarrière6,ThomasLübberstedt1*
Abstract
Background:OMT(O-methyltransferase)genesareinvolvedinligninbiosynthesis,whichrelatestostovercellwall
digestibility.Reducedlignincontentisanimportantdeterminantofbothforagequalityandethanolconversion
efficiencyofmaizestover.
Results:VariationingenomicsequencescodingforCOMT,CCoAOMT1,andCCoAOMT2wasanalyzedinrelationto
stovercellwalldigestibilityforapanelof40Europeanforagemaizeinbredlines,andre-analyzedforapanelof34
linesfromapublishedFrenchstudy.Differentmethodologiesforassociationanalysiswereperformedand
compared.Acrossassociationmethodologies,atotalnumberof25,12,1,6COMTpolymorphicsiteswere
significantlyassociatedwithDNDF,OMD,NDF,andWSC,respectively.AssociationanalysisforCCoAOMT1and
CCoAOMT2identifiedsubstantiallyfewerpolymorphicsites(3and2,respectively)associatedwiththeinvestigated
traits.Ourre-analysisonthe34linesfromapublishedFrenchdatasetidentified14polymorphicsitessignificantly
associatedwithcellwalldigestibility,twoofthemwereconsistentwithourstudy.Promisingpolymorphisms
putativelycausallyassociatedwithvariabilityofcellwalldigestibilitywereinferredfromthetotalnumberof
significantlyassociatedSNPs/Indels.
Conclusions:SeveralpolymorphicsitesforthreeO-methyltransferaselociwereassociatedwithstovercellwall
digestibility.AllthreetestedgenesseemtobeinvolvedincontrollingDNDF,inparticularCOMT.Thus,considerable
variationamongBm3wildtypeallelescanbeexploitedforimprovingcell-walldigestibility.Targetsitesfor
functionalmarkerswereidentifiedenablingdevelopmentofefficientmarker-basedselectionstrategies.
Background
procedures,enablingbetterethanolconversionefficiency
Stover cell-wall digestibility haslongbeenshowntob
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