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Prediction by Promoter Logic in Bacterial Quorum Sensing 英文参考文献
PredictionbyPromoterLogicinBacterialQuorum
Sensing
NavneetRai1,2,RajatAnand1,KrishnaRamkumar3,VarunSreenivasan4,SugatDabholkar1,K.V.
Venkatesh2,MukundThattai1*
1NationalCentreforBiologicalSciences,TataInstituteofFundamentalResearch,UAS/GKVKCampus,Bangalore,India,2DepartmentofBioSciencesandBioengineering,
IndianInstituteofTechnologyBombay,Powai,Mumbai,India,3DepartmentofChemistry,IndianInstituteofTechnologyBombay,Powai,Mumbai,India,4Departmentof
BiologicalSciences,St.Xavier’sCollege,Mumbai,India
Abstract
Quorum-sensing systems mediate chemical communication between bacterial cells, coordinating cell-density-dependent
processes like biofilm formation and virulence-factor expression. In the proteobacterial LuxI/LuxR quorum sensing
paradigm, a signaling molecule generated by an enzyme (LuxI) diffuses between cells and allosterically stimulates a
transcriptionalregulator(LuxR)toactivateitscognatepromoter(pR).ByexpressingeitherLuxIorLuxRinpositivefeedback
frompR,theseversatilesystemscangeneratesmooth(monostable)orabrupt(bistable)density-dependentresponsesto
suittheecologicalcontext.HerewecombinetheoryandexperimenttodemonstratethatthepromoterlogicofpR–its
measuredactivityasafunctionofLuxIandLuxRlevels–containsallthebiochemicalinformationrequiredtoquantitatively
predict the responses of such feedback loops. The interplay of promoter logic with feedback topology underlies the
versatilityoftheLuxI/LuxRparadigm:LuxRandLuxIpositive-feedbacksystemsshowdramaticallydifferentresponses,while
a dual positive/negative-feedback system displays synchronized oscillations. These results highlight the dual utility of
promoterlogic:toprobemicroscopicparametersandpredictmacroscopicphenotype.
Citation:RaiN,AnandR,RamkumarK,SreenivasanV,DabholkarS,etal.(2012)PredictionbyPromoterLogicinBacterialQuorumSensing.PLoSComputBiol8(1):
e1002361.doi:10.1371/journal.pcbi.1002361
Editor:NicolasBuchler,DukeInstituteforGenomeSciencesPolicy,UnitedStatesofAmerica
ReceivedJuly4,2011;AcceptedDecember8,2011;Pu
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