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Open Access
Re rch
2005StogiosetVoal.lumesea6, Issue 10, Article R82
Sequence and structural analysis of BTB domain proteins
Peter J Stogios*, Gregory S Downs?, Jimmy JS Jauhal*, Sukhjeen K Nandra*
and Gilbert G Privé*?§
Addresses: *Department of Medical Biophysics, University of Toronto, Toronto, Ontario, M5G 2M9, Canada. ?Bioinformatics Certificate
Program, Seneca College, Toronto, Ontario, M3J 3M6, Canada. ?Department of Biochemistry, University of Toronto, Toronto, Ontario, M5S
1A8, Canada. §Ontario Cancer Institute, 610 University Avenue, Toronto, Ontario, M5G 2M9, Canada.
Correspondence: Gilbert G Privé. E-mail: prive@uhnres.utoronto.ca
Published: 15 September 2005
Received: 29 March 2005
Revised: 20 June 2005
Accepted: 3 August 2005
Genome Biology 2005, 6:R82 (doi:10.1186/gb-2005-6-10-r82)
The electronic version of this article is the complete one and can be
found online at /2005/6/10/R82
? 2005 Stogios et al.; licensee BioMed Central Ltd.
This is an Open Access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0),
which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
eBTBteupiknasAr.domainyno/aptnesalryesproteinsviseaoflsthea hiproteingh strucarchitecture,tural conservgenomication anddistributionadapta andto isequencefferent moconservationdes of self-asofsoBTBciatiodomainn and inproteinsteractionins w17itfullyh nonsequenced-BTB pro-
Abstract
Background: The BTB domain (also known as the POZ domain) is a versatile protein-protein
interaction motif that participates in a wide range of cellular functions, including transcriptional
regulation, cytoskeleton dynamics, ion channel assembly and gating, and targeting proteins for
ubiquitination. Several BTB domain structures have been experimentally determined, revealing a
highly conserved core structure.
Results: We surveyed the protein architectur
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