Databases for Bioinformatics and Genomics[数据库的生物信息学和基因组学](PPT-76).pptVIP

PROSITE http://www.expasy.ch/prosite Manually curated, much like SWISS-PROT with regular expression style motifs, e.g. W-x(9,11)-[VFY]-[FYW]-x(6,7)-[GSTNE]-P Like SWISS-PROT, also a commercial venture PRINTS http://bioinf.man.ac.uk/dbbrowser/PRINTS Database of protein fingerprints Now has a relational version, PRINTS-S BLOCKS /blocks/ Automatically determined ungapped conserved segments Pfam (WashU/Sanger) / Protein families represented by profile HMMs generated from multiple sequence alignments. CDD (Conserved Domain Database) /Structure/cdd/cdd.shtml Based on SMART and Pfam, with some addit