通用的相互作用数据集.pdf

BioGRID: a general repository for interaction datasets(BioGRID：一种通用的相互作用数据集) 数据摘要： BioGRID is a freely accessible database of physical and genetic interactions. BioGRID release version 2.0 includes 116 000 interactions from Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster and Homo sapiens. Over 30 000 interactions have recently been added from 5778 sources through exhaustive curation of the Saccharomyces cerevisiae primary literature. An internally hyper-linked web interface allows for rapid search and retrieval of interaction data. Full or user-defined datasets are freely downloadable as tab-delimited text files and PSI-MI XML. Pre-computed graphical layouts of interactions are available in a variety of file formats. User-customized graphs with embedded protein, gene and interaction attributes can be constructed with a visualization system called Osprey that is dynamically linked to the BioGRID. 中文关键词： BioGRID,数据库,相互作用,酿酒酵母,线虫,果蝇,智人, 英文关键词： BioGRID,database,interactions,Saccharomyces cerevisiae,Caenorhabditis elegans,Drosophila melanogaster,Homo sapiens, 数据格式： TEXT 数据用途： Information Processing Classification 数据详细介绍： BioGRID: a general repository for interaction datasets Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M. Ontario Cancer Institute, Princess Margaret Hospital, 610 University Avenue, Toronto, Ontario, Canada M5G 2M9. Abstract Access to unified datasets of protein and genetic interactions is critical for interrogation of gene/protein function and analysis of global network properties. BioGRID is a freely accessible database of physical and genetic interactions available at . BioGRID release version 2.0 includes 116 000 interactions from Saccharomyces cerevisiae, Caenorhabditis elegans, Drosophila melanogaster and Homo sapiens. Over 30 000 interactions have recently been added from 5778 sources through exhaustive curation of the Sacc