生物信息学相关数据库 .pdfVIP

⽣物信息学相关数据库 ⽣物信息学数据库可以分为4⼤类:即基因组数据库、核酸和蛋⽩质⼀级结构数据库、⽣物⼤分⼦三维空间结构数据库，当 前研究⽐较热点的集中于基因组、miRNA、LncRNA、circRNA等分⼦的查询，以及蛋⽩或蛋⽩修饰变化（甲基化、⼄ 酰化等）与DNA启动⼦、miRNA、LncRNA、circRNA的互作，LncRNA与miRNA、mRNA、circRNA等相互的结合 调控，⽬前各种数据库⼤概有上百种，没有系统性针对性的数据库，以下是我们对数据的整理，通过数据库查询分类、数 据库功能及⽤途、⽰例结合分析、数据库优化等这四⼤项，进⾏阐述和演⽰数据库的查询和使⽤，希望对您的实验项⽬有 所帮助 基因查询数据库： 查询获取你的基因信息及相关序列信息 ④EBI：http ：// ⑤NIG：http：// MiR NA查询数据库： LncR NA查询数据库： c irc R NA查询数据库： 常⽤数据库功能⽤途介绍： 基因数据库功能： 1. NCBI： The National Center for Biotechnology Information advances science and health by providing access to biomedical and genomic information 数据库功能： Submit ：NCBI collects submissions of data for the worlds largest public repository of biological and scientific information Download：The majority of NCBI data are available for downloading, either directly from the NCBI FTP site or by usingDownload software tools to download custom datasets Learn ：NCBI creates a variety of educational products including courses, workshops, webinars, training materials and documentation. NCBI educational events are free and open to everyone. All NCBI educational materials are available for anyone to re-use and distribute. Develop：NCBI provides a variety of resources that allow developers to access and manipulate NCBI data in theirDevelop applications. Analyze：NCBI provides a wide variety of data analysis tools that allow users to manipulate, align, visualize and evaluateAnalyze biological data. 2.UCSC Genome Brow serser：： The UCSC Genome Browser is developed and maintained by the Genome Bioinformatics Group, a cross-departmental team within the UCSC Genomics Institute. the website has grown to include a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data. 数据库功能： Genome Browser：interactively visualize genomic dataGenome Browser BLAT：rapidly align sequences to the genomeBLAT Tabl