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method of the year COMMENTARY special feature
The promise of single-cell sequencing
1,2 1 3 2,4
James Eberwine , Jai-Yoon Sul , Tamas Bartfai Junhyong Kim
Individual cells of the same phenotype are commonly viewed as identical functional units of a tissue
or organ. However, the deep sequencing of DNA and RNA from single cells suggests a more complex
ecology of heterogeneous cell states that together produce emergent system-level function. Continuing
development of high-content, real-time, multimodal single-cell measurement technologies will lead to the
ultimate goal of understanding the function of an individual cell in the context of its microenvironment.
.
d
e Since 1665, when Robert Hooke used the level, and the nature of this cellular ecology, is or nanotube to harvest the cytoplasmic con-
v
r
e term “cell” to describe a structure in cork fertile territory for exploration. Furthermore, tents of single cells is a common method for
s
e
r
s that he observed under his microscope, cells if we posit that cellular phenotype is a func- the isolation of cellular RNA, but it may
t 3
h
g have been objects of intense study. Although tion of the local ecology of individual cells , leave cellular subcompartments behind.
i
r the existence of distinct cell types was obvi- how many such distinct ecologies exist in a Microfluidic device
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