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INCHINAPRESS
。2nAYl移SCIENCE
仓sp她口
A modelof RNA
fuzzy predictingsecondary
structure
SONGDanDanDENG
ZhiDong’
of ofInformationScienceand
Department Science.National
Computer Laboratory Technology
100084.China
TsinghuaUniversity,Beijing
We anovelmodelto RNA 8tructMrsbasedonthe
propose predictsecondary fuzzy
aeta the ofstate andthe of
theory.Throughfuzzypartition spaces IncorpOration
canfindthe ofthemodel
fuzzygoals,we optimalfuzzy fuzzydynamic
policy using
thande佃rmIne and
programmingalgorithmeffectively,and optimalsuboptimaI
RNA tothe
secondarystructures.Comparedexistingsophisticatedprediction
asZuker’SmethodandtheSCFG modelbased
models,such model,ourfuzzy ap-
has canbereducadthe
proachmanyadvantages:1)computationalcomplexity by
atructureandsevereI onescan
fuzzypartition;2theoptimalsecondary suboptimal
be can be
generatedsimultaneously;and3)aubiectivepriorknowledgereadily
ofour modeland
incorporated.Thispaperpresen协acompletedescriptionfuzzy
the ofthe method.Wealso theBJK
givesimplementationproposed apply fuzzy
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