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PubChemBioassayDataDataSet(PubChem数据库生物测定数据的数据集)_数据挖掘_科研数据集
PubChem Bioassay Data Data Set (PubChem 数据库
生物测定数据的数据集)
英文关键词:
PubChem Bioassay Data,bioassay datasets, Pubchem,UCI,
中文关键词:
PubChem Bioassay Data,bioassay datasets, Pubchem,UCI,
数据格式:
TEXT
数据介绍:
Abstract: These highly imbalanced bioassay datasets are from the
differing types of screening that can be performed using HTS technology.
21 datasets were created from 12 bioassays.
Data Set Characteristics:
Multivariate
Number of Instances:
N/A
Area:
Life
Attribute Characteristics:
Integer, Real
Number of Attributes:
N/A
Date Donated
2011-03-29
Associated Tasks:
Classification
Missing Values?
N/A
Number of Web Hits:
1407
Source:
Virtual Screening of Bioassay Data
Amanda C Schierz,Smart Technology Research Centre, Bournemouth
University, Talbot Campus, Poole, Dorset, BH12 5BB, UK
Journal of Cheminformatics 2009, 1:21 doi:10.1186/1758-2946-1-21
Data Set Information:
21 bioassay datasets generated from Pubchem. Both Primary and
confirmatory bioassays (12 bioassays, 21 mixes)The data is provided in
the same train/test split as the original paper. The compound IDs have
been provided in separate files in case people wish to generate their own
molecular representation. The order of the compound Ids is the same as
the data files.
? AID362 details the results of a primary screening bioassay for
Formylpeptide Receptor Ligand Binding University from the New
Mexico Center for Molecular Discovery. It is a relatively small dataset
with 4279 compounds and with a ratio of 1 active to 70 inactive
compounds (1.4% minority class). The compounds were selected on the
basis of preliminary virtual screening of approximately 480,000 drug-like
small molecules from Chemical Diversity Laboratories.
? AID456 is a primary screen assay from the Burnham Center for
Chemical Genomics for inhibition of TNFa induced VCAM-1 cell surface
expression and consists of 9,982 compounds with a ra
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