XCMS_demo.pptVIP

XCMS Analyte Profiling Software Tutorial * This tutorial uses the FAAH data, downloaded from the XCMS homepage (/download/) to lead the user through each step of xcms. 7 simple commands for one complete XCMS data analysis library(xcms) xset - xcmsSet() xset - group(xset) xset2 - retcor(xset, family=s, plottype=m) xset2 - group(xset2, bw =10) xset3 - fillPeaks(xset2) reporttab - diffreport(xset3, WT, KO, example, 10, metlin = 0.15) Open R, load xcms User input is shown in red Go to File toolbar at the top of R, choose Change dir…, and select the folder containing the .cdf files Uploa