5′UTR Variants of Ribosomal Protein S19 Transcript Determine Translational Efficiency Implications for Diamond-Blackfan Anemia and Tissue Variability 英文参考文献.docVIP

5′UTR Variants of Ribosomal Protein S19 Transcript Determine Translational Efficiency Implications for Diamond-Blackfan Anemia and Tissue Variability 英文参考文献.doc

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5′UTR Variants of Ribosomal Protein S19 Transcript Determine Translational Efficiency Implications for Diamond-Blackfan Anemia and Tissue Variability 英文参考文献

59UTRVariantsofRibosomalProteinS19Transcript DetermineTranslationalEfficiency:Implicationsfor Diamond-BlackfanAnemiaandTissueVariability JitendraBadhai.¤a,JensSchuster.,OlofGidlo¨f¤b,NiklasDahl* DepartmentofImmunology,GeneticsandPathology,ScienceforLifeLaboratoryandRudbeckLaboratory,UppsalaUniversity,Uppsala,Sweden Abstract Background: Diamond-Blackfan anemia (DBA) is a lineage specific and congenital erythroblastopenia. The disease is associatedwithmutationsingenesencodingribosomalproteinsresultinginperturbedribosomalsubunitbiosynthesis.The RPS19geneismutatedinapproximately25%ofDBApatientsandavarietyofcodingmutationshavebeendescribed,all presumably leading to haploinsufficiency. A subset of patients carries rare polymorphic sequence variants within the 59untranslatedregion(59UTR)ofRPS19.Thefunctionalsignificanceofthesevariantsremainsunclear. Methodology/PrincipalFindings:Weanalyzedthedistributionoftranscriptionalstartsites(TSS)forRPS19mRNAsintestis andK562cells.Twenty-ninenovelRPS19transcriptswereidentifiedwithdifferent59UTRlength.Quantificationofexpressed w.t.59UTR variantsrevealedthatashort59UTRcorrelateswithhighlevelsofRPS19.Thetotallevelsof RPS19 transcripts showedabroadvariationbetweentissues.WealsoexpressedthreepolymorphicRPS1959UTRvariantsidentifiedinDBA patients.Thesequencevariantsincludetwoinsertions(c.-147_-146insGCCAandc.-147_-146insAGCC)andonedeletion(c.- 144_-141delTTTC).Thethree59UTRpolymorphismsareassociatedwitha20–30%reductioninRPS19proteinlevelswhen comparedtothewild-type(w.t.)59UTRofcorrespondinglength. Conclusions: TheRPS19geneusesabroadrangeofTSSandashort59UTRisassociatedwithincreasedlevelsofRPS19. ComparisonsbetweentissuesshowedabroadvariationinthetotalamountofRPS19mRNAandinthedistributionofTSS used.Furthermore,ourresultsindicatethatrarepolymorphic59UTRvariantsreduceRPS19proteinlevelswithimplications forDiamond-Blackfananemia. Citation:BadhaiJ,SchusterJ,Gidlo¨fO,DahlN(2011)59UTRVariantsofRibosomalProteinS19TranscriptDetermineTransla

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