Global Chromosomal Structural Instability in a Subpopulation of Starving Escherichia coli Cells 英文参考文献.docVIP
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Global Chromosomal Structural Instability in a Subpopulation of Starving Escherichia coli Cells 英文参考文献
GlobalChromosomalStructuralInstabilityina
SubpopulationofStarvingEscherichiacoliCells
DongxuLin1,IanB.Gibson1,JessicaM.Moore2,P.C.Thornton1,SuzanneM.Leal1,P.J.Hastings1*
1Department ofMolecular andHuman Genetics,Baylor College ofMedicine,Houston,Texas, United States ofAmerica, 2Department ofBiochemistry andMolecular
Biology,BaylorCollegeofMedicine,Houston,Texas,UnitedStatesofAmerica
Abstract
Copy-numbervariations(CNVs)constituteverycommondifferencesbetweenindividualhumansandpossiblyallgenomes
and may therefore be important fuel for evolution, yet how they form remains elusive. In starving Escherichia coli , gene
amplification is induced by stress, controlled by the general stress response. Amplification has been detected only
encompassing genes that confer a growth advantage when amplified. We studied the structure of stress-induced gene
amplificationinstarvingcellsintheLacassayinEscherichiacolibyarraycomparativegenomichybridization(aCGH),with
polymerasechainreaction(pcr)andDNAsequencingtoestablishthestructuresgenerated.About10%of300amplified
isolates carried other chromosomal structural change in addition to amplification. Most of these were inversions and
duplicationsassociatedwiththeamplificationevent.Thiscomplexitysupportsamechanismsimilartothatseeninhuman
non-recurrentcopynumbervariants.Weinterpretthesecomplexeventsintermsofrepeatedtemplateswitchingduring
DNAreplication.Importantly,wefoundasignificantoccurrence(6outof300)ofchromosomalstructuralchangesthatwere
apparentlynotinvolvedintheamplificationevent.Thesesecondarychangeswereabsentfrom240samplesderivedfrom
starvedcellsnotcarryingamplification,suggestingthatamplificationhappensinadifferentiatedsubpopulationofstressed
cells licensed for global chromosomal structural change and genomic instability. These data imply that chromosomal
structuralchangesoccurinburstsorshowersofinstabilitythatmayhavethepotentialtodriverapidevolution.
Citation:LinD,GibsonIB,MooreJM,ThorntonPC,LealSM,etal.(2011)GlobalChromosomalStru
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