Expressionview visualization of quantitative trait loci and gene-expression data in Ensembl.docVIP

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Expressionview visualization of quantitative trait loci and gene-expression data in Ensembl.doc

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Expressionview visualization of quantitative trait loci and gene-expression data in Ensembl

Open Access So are 2003FischeretVoal.lumeftw4, Issue 11, Article R77 Expressionview: visualization of quantitative trait loci and gene-expression data in Ensembl Gertrud Fischer*, Saleh M Ibrahim*, Gudrun A Brockmann?, Jens Pahnke?, Ezio Bartocci§, Hans-Jürgen Thiesen*, Pablo Serrano-Fernández* and Steffen M?ller* Addresses: *University of Rostock, Institute of Immunology, Joachim-Jungius-Strasse 9, 18059 Rostock, Germany. ?Research Institute for Biology of Farm Animals, Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany. ?University of Zurich, Institute of Neuropathology, Schmelzbergstrasse 12, 8091 Zurich, Switzerland. §University of Camerino, Department of Computer Science and Mathematics, Via Madonna delle Carceri, 62032, Camerino (MC), Italy. Correspondence: Steffen M?ller. E-mail: moeller@pzr.uni-rostock.de Published: 10 October 2003 Received: 3 June 2003 Revised: 30 July 2003 Accepted: 2 September 2003 Genome Biology 2003, 4:R77 The electronic version of this article is the complete one and can be found online at /2003/4/11/R77 ? 2003 Fischer et al.; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the articles original URL. Expressionview:WitemixoepnrplaeerlsmecssaieeonnnndtteiledhdvaeaetrselesagavisualizationtneosneotehxfstetwegnaesrtniehooetnmocotiofoclnfctquantitativetohoerenxctEeoonxmftsrbeoemifsniebenadldrtraitpicvvrhiiosdoujuenalocicaltcilzoagamneandtnidpoecnlseagene-expressionaxotneftrdrgsaeQifntoTser.L-ae.xIdptirseuscpstpitdataoornrandssatinihtaieoEnsemblandvnisfruoaquantitativemlizmaticornooafrrgaetraitynexcplociuesrtme(QTL).resnatnsdotThefhge snapplicationeeleocrtipornotoefifnuisnc- Abstract We present here a software tool for combined visualization of gene-expression data and quantitative trait loci (QTL). The application is implemented as an extension to the Ensembl pro