原创力文档colinearity and similar expression pattern of rice dreb1s reveal their functional conservation in the cold-responsive pathway同线性和类似的表达式模式cold-responsive大米dreb1s揭示其功能保护的途径.pdfVIP
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colinearity and similar expression pattern of rice dreb1s reveal their functional conservation in the cold-responsive pathway同线性和类似的表达式模式cold-responsive大米dreb1s揭示其功能保护的途径
Colinearity and Similar Expression Pattern of Rice
DREB1s Reveal Their Functional Conservation in the
Cold-Responsive Pathway
Donghai Mao, Caiyan Chen*
Key Laboratory of Agro-Ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, China
Abstract
The clustered genes C-repeat (CRT) binding factor (CBF)1/dehydration-responsive element binding protein (DREB)1B, CBF2/
DREB1C, and CBF3/DREB1A play a central role in cold acclimation and facilitate plant resistance to freezing in Arabidopsis
thaliana. Rice (Oryza sativa L.) is very sensitive to low temperatures; enhancing the cold stress tolerance of rice is a key
challenge to increasing its yield. In this study, we demonstrate chilling acclimation, a phenomenon similar to Arabidopsis
cold acclimation, in rice. To determine whether rice CBF/DREB1 genes participate in this cold-responsive pathway, all
putative homologs of Arabidopsis DREB1 genes were filtered from the complete rice genome through a BLASTP search,
followed by phylogenetic, colinearity and expression analysis. We thereby identified 10 rice genes as putative DREB1
homologs: nine of these were located in rice genomic regions with some colinearity to the Arabidopsis CBF1–CBF4 region.
Expression profiling revealed that six of these genes (Os01g73770, Os02g45450, Os04g48350, Os06g03670, Os09g35010,
and Os09g35030) were similarly expressed in response to chilling acclimation and cold stress and were co-expressed with
genes involved in cold signalling, suggesting that these DREB1 homologs may be involved in the cold response in rice. The
results presented here serve as a prelude towards understanding the function of rice homologs of DREB1 genes in cold-
sensitive crops.
Citation: Mao D, Chen C (2012) Colinearity and Similar Expression Pattern of
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