efficient computation of the inverse of gametic relationship matrix for a marked qtl高效计算配子关系矩阵的逆的qtl.pdfVIP
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efficient computation of the inverse of gametic relationship matrix for a marked qtl高效计算配子关系矩阵的逆的qtl
Genet. Sel. Evol. 38 (2006) 253–264 253
c
INRA, EDP Sciences, 2006
DOI: 10.1051/gse:2006002
Original article
Efficient computation of the inverse
of gametic relationship matrix
for a marked QTL
Mehdi Sa∗, Hiroaki Ia,b ,
Jean-Jacques Cc
a Course of Environmental Management Science, Graduate School of Science and Technology,
Niigata 950-2181, Japan
b Department of Agro-biology, Faculty of Agriculture, Niigata University,
Niigata 950-2181, Japan
c Station de génétique quantitative et appliquée, Institut national de la recherche agronomique,
78352 Jouy-en-Josas Cedex, France
(Received 27 May 2005; accepted 1 December 2005)
Abstract – Best linear unbiased prediction of genetic merits for a marked quantitative trait locus
(QTL) using mixed model methodology includes the inverse of conditional gametic relationship
matrix (G−1) for a marked QTL. When accounting for inbreeding, the conditional gametic re-
lationships between two parents of individuals for a marked QTL are necessary to build G−1
directly. Up to now, the tabular method and its adaptations have been used to compute these
relationships. In the present paper, an indirect method was implemented at the gametic level to
compute thes
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