Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene.docVIP

Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene.doc

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Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene

Songetal.VirologyJournal2010,7:353 /content/7/1/353 SHORT REPORT OpenAccess Detectionofporcineparvovirususinga taqman-basedreal-timepcrwithprimersand probedesignedfortheNS1gene CuipingSong1,2?,ChaoZhu ,ChaofanZhang ,ShangjinCui3* 3? 3 Abstract ATaqMan-basedreal-timepolymerasechainreaction(PCR)assaywasdevisedforthedetectionofporcineparvo- virus(PPV).TwoprimersandaTaqManprobeforthenon-structuralproteinNS1geneweredesigned.Thedetec- 2 2 9 tionlimitwas1×10 DNAcopies/μL,andtheassaywaslinearintherangeof1×10 to1×10 copies/μ L.There wasnocross-reactionwithporcinecircovirus2(PCV2),porcinereproductiveandrespiratorysyndromevirus (PRRSV),pseudorabiesvirus(PRV),classicalswinefevervirus(CSFV),orJapaneseencephalitisvirus(JEV).Theassay wasspecificandreproducible.In41clinicalsamples,PPVwasdetectedin32sampleswiththereal-timePCRassay andinonly11sampleswithaconventionalPCRassay.Thereal-timeassayusingtheTaqMan-systemcantherefore bepracticallyusedforstudyingtheepidemiologyandmanagementofPPV. Introduction Incontrast,real-timePCRusingSYBRGreenandTaqMan Porcine parvovirus (PPV) isanautonomous parvovirus israpid,specific,andefficientforthelarge-scalescreening, belongingtothegenusparvovirus, subfamily Parvoviri- strainidentification,andquantificationofPPV[9]. nae,familyParvoviridae.Itisoneofthemajoretiologi- NS1, which is encoded by the NS1 gene, is a main cal agents of reproductive failure in pigs. Reproductive nonstructuralproteinofPPVandisassociatedwiththe failure caused by PPV is characterized by embryonic earlyandlatetranscriptionofthevirus.Giventhatinac- andfoetaldeath,mummification,stillbirth, anddelayed tivated virus used in current vaccines have only little return to oestrus [1]. Inaddition, PPV has been impli- NS1proteinwhichcouldnotproduceantibody,thepre- cated as the causative agent of diarrhea, skin disease, senceorabsenceofantibodyagainstNS1proteincould andarthritis inswine [2]. PPVhas been reported from beusedinanNS1-baseddiagnostickitfordetermining m

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