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An Auxin Transport-Based Model of Root Branching in Arabidopsis thaliana 英文参考文献
AnAuxinTransport-BasedModelofRootBranchingin
Arabidopsisthaliana
Mikae¨lLucas1,2,3,YannGue′don2,ChristianJay-Allemand3,ChristopheGodin2,LaurentLaplaze1*
1IRD, UMR DIAPC (INRA/IRD/Montpellier SupAgro/UM2), Equipe Rhizogene`se, Montpellier, France, 2INRIA, UMR DAP (CIRAD/INRIA/INRA/Montpellier SupAgro/UM2),
VirtualPlants,Montpellier,France,3Universite′ MontpellierII,UMRDIAPC(INRA/IRD/MontpellierSupAgro/UM2),EquipeRhizogene`se, Montpellier,France
Abstract
Rootarchitectureisacrucialpartofplantadaptationtosoilheterogeneityandismainlycontrolledbyrootbranching.The
process of root system development can be divided into two successive steps: lateral root initiation and lateral root
development/emergence which are controlled by different fluxes of the plant hormone auxin. While shoot architecture
appearstobehighlyregular,followingrulessuchasthephyllotacticspiral,rootarchitectureappearsmorechaotic.Weused
stochastic modeling to extract hidden rules regulating root branching in Arabidopsis thaliana. These rules were used to
buildanintegrativemechanisticmodelofrootramificationbasedonauxin.Thismodelwasexperimentallytestedusing
plantswithmodifiedrhythmoflateralrootinitiationormutantsperturbedinauxintransport.Ouranalysisrevealedthat
lateralrootinitiationandlateralrootdevelopment/emergenceareinteractingwitheachothertocreateaglobalbalance
betweentherespectiveratioofinitiationandemergence.Amechanisticmodelbasedonauxinfluxessuccessfullypredicted
this property and the phenotype alteration of auxin transport mutants or plants with modified rythms of lateral root
initiation.Thissuggeststhatrootbranchingiscontrolledbymechanismsoflateralinhibitionduetoacompetitionbetween
initiationanddevelopment/emergenceforauxin.
Citation: Lucas M, Gue′don Y, Jay-Allemand C, Godin C, Laplaze L (2008) An Auxin Transport-Based Model of Root Branching in Arabidopsis thaliana . PLoS
ONE3(11):e3673.doi:10.1371/journal.pone.0003673
Editor:NickMonk,UniversityofNottingham,UnitedKingdom
ReceivedJuly29,2008;A
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