Functional Divergence in the Genus Oenococcus as Predicted by Genome Sequencing of the Newly-Described Species, Oenococcus kitaharae 英文参考文献.docVIP

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Functional Divergence in the Genus Oenococcus as Predicted by Genome Sequencing of the Newly-Described Species, Oenococcus kitaharae 英文参考文献.doc

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Functional Divergence in the Genus Oenococcus as Predicted by Genome Sequencing of the Newly-Described Species, Oenococcus kitaharae 英文参考文献

FunctionalDivergenceintheGenusOenococcusas PredictedbyGenomeSequencingoftheNewly- DescribedSpecies,Oenococcuskitaharae AnthonyR.Borneman*,JaneM.McCarthy,PaulJ.Chambers,EvelineJ.Bartowsky TheAustralianWineResearchInstitute,GlenOsmond,SouthAustralia,Australia Abstract OenococcuskitaharaeisonlythesecondmemberofthegenusOenococcustobeidentifiedandistheclosestrelativeofthe industriallyimportantwinebacteriumOenococcusoeni.Toprovideinsightintothisnewspecies,thegenomeofthetype strainofO.kitaharae,DSM17330,wassequenced.Comparisonofthesequencedgenomesofbothspeciesshowthatthe genome of O. kitaharae DSM 17330 contains many genes with predicted functions in cellular defence (bacteriocins, antimicrobials, restriction-modification systems and a CRISPR locus) which are lacking in O. oeni. The two genomes also appear to differentially encode several metabolic pathways associated with amino acid biosynthesis and carbohydrate utilizationandwhichhavedirectphenotypicconsequences.Thiswouldindicatethatthetwospecieshaveevolveddifferent survivaltechniquestosuittheirparticularenvironmentalniches.O.oenihasadaptedtosurviveintheharsh,butpredictable, environment of wine that provides very few competitive species. However O. kitaharae appears to have adapted to a growthenvironmentinwhichbiologicalcompetitionprovidesasignificantselectivepressurebyaccumulatingbiological defencemolecules,suchasbacteriocinsandrestriction-modificationsystems,throughoutitsgenome. Citation:BornemanAR,McCarthyJM,ChambersPJ,BartowskyEJ(2012)FunctionalDivergenceintheGenusOenococcusasPredictedbyGenomeSequencingof theNewly-DescribedSpecies,Oenococcuskitaharae.PLoSONE7(1):e29626.doi:10.1371/journal.pone.0029626 Editor:ArnabPain,KingAbdullahUniversityofScienceandTechnology,SaudiArabia ReceivedAugust2,2011;AcceptedDecember2,2011;PublishedJanuary3,2012 Copyright: ?2012 Borneman et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricteduse,distributio