Pub1p C-Terminal RRM Domain Interacts with Tif4631p through a Conserved Region Neighbouring the Pab1p Binding Site 英文参考文献.docVIP

Pub1p C-Terminal RRM Domain Interacts with Tif4631p through a Conserved Region Neighbouring the Pab1p Binding Site 英文参考文献.doc

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Pub1p C-Terminal RRM Domain Interacts with Tif4631p through a Conserved Region Neighbouring the Pab1p Binding Site 英文参考文献

Pub1pC-TerminalRRMDomainInteractswithTif4631p throughaConservedRegionNeighbouringthePab1p BindingSite ClaraM.Santiveri.¤,YasminaMirassou.,PalmaRico-Lastres,SantiagoMart?′nez-Lumbreras.,Jose′ ManuelPe′rez-Can?adillas* DepartmentofBiologicalPhysicalChemistry,InstitutodeQu?′mica-F?′sica‘‘Rocasolano’’,CSIC,Madrid,Spain Abstract Pub1p, a highly abundant poly(A)+ mRNA binding protein in Saccharomyces cerevisiae, influences the stability and translationalcontrolofmanycellulartranscripts,particularlyundersometypesofenvironmentalstresses.Wehavestudied thestructure,RNAandproteinrecognitionmodesofdifferentPub1pconstructsbyNMRspectroscopy.Thestructureofthe C-terminal RRMdomain (RRM3) shows anon-canonical N-terminal helix that packs against the canonical RRM fold in an originalfashion.ThisstructuraltraitisconservedinPub1pmetazoanhomologues,theTIA-1family,defininganewclassof RRM-typedomainsthatweproposetonameTRRM(TIA-1C-terminaldomain-likeRRM).Pub1pTRRMandtheN-terminal RRM1-RRM2tandembindRNAwithhighselectivityforU-richsequences,withTRRMshowingadditionalpreferenceforUA- richones.RNA-mediatedchemicalshiftchangesmaptob-sheetandproteinloopsinthethreeRRMs.Additionally,NMR titrationandbiochemicalinvitrocross-linkingexperimentsdeterminedthatPub1pTRRMinteractsspecificallywiththeN- terminal region (1–402) of yeast eIF4G1 (Tif4631p), very likely through the conserved Box1, a short sequence motif neighbouringthePab1pbindingsiteinTif4631p.TheinteractioninvolvesconservedresiduesofPub1pTRRM,whichdefine aproteininterfacethatmirrorsthePab1p-Tif4631pbindingmode.NeitherproteinnorRNArecognitioninvolvesthenovel N-terminalhelix,whosefunctionalroleremainsunclear.Byintegratingthesenewresultswiththecurrentknowledgeabout Pub1p,weproposeddifferentmechanismsofPub1precruitmenttothemRNPsandPub1p-mediatedmRNAstabilizationin whichthePub1p/Tif4631pinteractionwouldplayanimportantrole. Citation: Santiveri CM, Mirassou Y, Rico-Lastres P, Mart?′nez-Lumbreras S, Pe′rez-Can?adillas JM (2011) Pub1p C-Terminal RRM Do

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