Pub1p C-Terminal RRM Domain Interacts with Tif4631p through a Conserved Region Neighbouring the Pab1p Binding Site 英文参考文献.docVIP
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Pub1p C-Terminal RRM Domain Interacts with Tif4631p through a Conserved Region Neighbouring the Pab1p Binding Site 英文参考文献
Pub1pC-TerminalRRMDomainInteractswithTif4631p
throughaConservedRegionNeighbouringthePab1p
BindingSite
ClaraM.Santiveri.¤,YasminaMirassou.,PalmaRico-Lastres,SantiagoMart?′nez-Lumbreras.,Jose′
ManuelPe′rez-Can?adillas*
DepartmentofBiologicalPhysicalChemistry,InstitutodeQu?′mica-F?′sica‘‘Rocasolano’’,CSIC,Madrid,Spain
Abstract
Pub1p, a highly abundant poly(A)+ mRNA binding protein in Saccharomyces cerevisiae, influences the stability and
translationalcontrolofmanycellulartranscripts,particularlyundersometypesofenvironmentalstresses.Wehavestudied
thestructure,RNAandproteinrecognitionmodesofdifferentPub1pconstructsbyNMRspectroscopy.Thestructureofthe
C-terminal RRMdomain (RRM3) shows anon-canonical N-terminal helix that packs against the canonical RRM fold in an
originalfashion.ThisstructuraltraitisconservedinPub1pmetazoanhomologues,theTIA-1family,defininganewclassof
RRM-typedomainsthatweproposetonameTRRM(TIA-1C-terminaldomain-likeRRM).Pub1pTRRMandtheN-terminal
RRM1-RRM2tandembindRNAwithhighselectivityforU-richsequences,withTRRMshowingadditionalpreferenceforUA-
richones.RNA-mediatedchemicalshiftchangesmaptob-sheetandproteinloopsinthethreeRRMs.Additionally,NMR
titrationandbiochemicalinvitrocross-linkingexperimentsdeterminedthatPub1pTRRMinteractsspecificallywiththeN-
terminal region (1–402) of yeast eIF4G1 (Tif4631p), very likely through the conserved Box1, a short sequence motif
neighbouringthePab1pbindingsiteinTif4631p.TheinteractioninvolvesconservedresiduesofPub1pTRRM,whichdefine
aproteininterfacethatmirrorsthePab1p-Tif4631pbindingmode.NeitherproteinnorRNArecognitioninvolvesthenovel
N-terminalhelix,whosefunctionalroleremainsunclear.Byintegratingthesenewresultswiththecurrentknowledgeabout
Pub1p,weproposeddifferentmechanismsofPub1precruitmenttothemRNPsandPub1p-mediatedmRNAstabilizationin
whichthePub1p/Tif4631pinteractionwouldplayanimportantrole.
Citation: Santiveri CM, Mirassou Y, Rico-Lastres P, Mart?′nez-Lumbreras S, Pe′rez-Can?adillas JM (2011) Pub1p C-Terminal RRM Do
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