原创力文档A polynomial time algorithm for calculating the probability of a ranked gene tree given a species tree.docVIP
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A polynomial time algorithm for calculating the probability of a ranked gene tree given a species tree
StadlerandDegnanAlgorithmsforMolecularBiology2012,7:7
/content/7/1/7
RESEARCH
OpenAccess
Apolynomialtimealgorithmforcalculating
theprobabilityofarankedgenetreegivena
speciestree
TanjaStadler1*andJamesHDegnan2,3
Abstract
Background: Theancestriesofgenesformgenetreeswhichdonotnecessarilyhavethesametopologyasthe
speciestreeduetoincompletelineagesorting.Availablealgorithmsdeterminingtheprobabilityofagenetreegiven
aspeciestreerequireexponentialcomputationalruntime.
Results: Inthispaper,weprovideapolynomialtimealgorithmtocalculatetheprobabilityofarankedgenetree
topologyforagivenspeciestree,wherear
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