聚类算法在R中的实现.pptx

聚类算法在R中的实现 CRAN Task View: Cluster Analysis Finite Mixture Models Maintainer: Friedrich Leisch and Bettina Gruen Contact: Bettina.Gruen at jku.at Version: 2016-05-29 This CRAN Task View contains a list of packages that can be used for finding groups in data and modeling unobserved cross-sectional heterogeneity. Many packages provide functionality for more than one of the topics listed below, the section headings are mainly meant as quick starting points rather than an ultimate categorization. Except for packages stats and cluster (which ship with base R and hence are part of every R installation), each package is listed only once. Most of the packages listed in this CRAN Task View, but not all are distributed under the GPL. Please have a look at the DESCRIPTION file of each package to check under which license it is distributed. Hierarchical Clustering: Functions hclust() from package stats and agnes() from cluster are the primary functions for agglomerative hierarchical clustering, function diana() can be used for divisive hierarchical clustering. Faster alternatives to hclust() are provided by the packages fastcluster and flashClust. Function dendrogram() from stats and associated methods can be used for improved visualization for cluster dendrograms. The dendextend package provides functions for easy visualization (coloring labels and branches, etc.), manipulation (rotating, pruning, etc.) and comparison of dendrograms (tangelgrams with heuristics for optimal branch rotations, and tree correlation measures with bootstrap and permutation tests for significance). Package dynamicTreeCut contains methods for detection of clusters in hierarchical clustering dendrograms. Package genie implements a fast hierarchical clustering algorithm with a linkage criterion which is a variant of the single linkage method combining it with the Gini inequality measure to robustify the linkage method while retaining computational efficiency to allow for the use of larger data se