a conserved ga element in tata-less rna polymerase ii promoters守恒的ga元素tata-less rna聚合酶ii推动者.pdfVIP

a conserved ga element in tata-less rna polymerase ii promoters守恒的ga元素tata-less rna聚合酶ii推动者.pdf

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a conserved ga element in tata-less rna polymerase ii promoters守恒的ga元素tata-less rna聚合酶ii推动者

A Conserved GA Element in TATA-Less RNA Polymerase II Promoters . . . ¤ Martin Seizl , Holger Hartmann , Friederike Hoeg , Fabian Kurth , Dietmar E. Martin, Johannes ¨ Soding*, Patrick Cramer* ¨ ¨ Department of Biochemistry and Gene Center, Center for Integrated Protein Science Munich (CIPSM), Ludwig-Maximilians-Universitat (LMU) Munchen, Munich, Germany Abstract Initiation of RNA polymerase (Pol) II transcription requires assembly of the pre-initiation complex (PIC) at the promoter. In the classical view, PIC assembly starts with binding of the TATA box-binding protein (TBP) to the TATA box. However, a TATA box occurs in only 15% of promoters in the yeast Saccharomyces cerevisiae, posing the question how most yeast promoters nucleate PIC assembly. Here we show that one third of all yeast promoters contain a novel conserved DNA element, the GA element (GAE), that generally does not co-occur with the TATA box. The distance of the GAE to the transcription start site (TSS) resembles the distance of the TATA box to the TSS. The TATA-less TMT1 core promoter contains a GAE, recruits TBP, and supports formation of a TBP-TFIIB-DNA-complex. Mutation of the promoter region surrounding the GAE abolishes transcription in vivo and in vitro. A 32-nucleotide promoter region containing the GAE can functionally substitute for the TATA box in a TATA-containing promoter. This identifies the GAE as a conserved promoter element in TATA-less promoters. Citation: Seizl M, Hartmann H, Hoeg F, Kurth F, Martin DE, et al. (2011) A Conserved GA Element in TATA-Less RNA Polymer

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