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the draft genome and transcriptome of cannabis sativa草案基因组和转录组的大麻
The draft genome and transcriptome of Cannabis
sativa
van Bakel et al.
van Bakel et al. Genome Biology 2011, 12:R102
/2011/12/10/R102 (24 October 2011)
van Bakel et al. Genome Biology 2011, 12:R102
/2011/12/10/R102
RESEARCH Open Access
The draft genome and transcriptome of Cannabis
sativa
1 2,3 1 3 3 1,4*
Harm van Bakel , Jake M Stout , Atina G Cote , Carling M Tallon , Andrew G Sharpe , Timothy R Hughes and
Jonathan E Page2,3*
Abstract
Background: Cannabis sativa has been cultivated throughout human history as a source of fiber, oil and food, and
for its medicinal and intoxicating properties. Selective breeding has produced cannabis plants for specific uses,
including high-potency marijuana strains and hemp cultivars for fiber and seed production. The molecular biology
underlying cannabinoid biosynthesis and other traits of interest is largely unexplored.
Results: We sequenced genomic DNA and RNA from the marijuana strain Purple Kush using shortread approaches.
We report a draft haploid genome sequence of 534 Mb and a transcriptome of 30,000 genes. Comparison of the
transcriptome of Purple Kush with that of the hemp cultivar ‘Finola’ revealed that many genes encoding proteins
involved in cannabinoid and precursor pathways are more highly expressed in Purple Kush than in ‘Finola’. The
exclusive occurrence of Δ9-tetrahydrocannabinolic acid synthase in the Purple Kush transcriptome, and its
9
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