BWA操作手册.docxVIP

Manual Reference Pages - bwaNAMEbwa - Burrows-Wheeler Alignment ToolCONTENTS(1) Synopsis(2) Description(3) Commands And Options(4) Sam Alignment Format(5) Notes On Short-read Alignment Alignment Accuracy Estimating Insert Size Distribution Memory Requirement Speed(6) Changes In Bwa-0.6(7) License And CitationSYNOPSISbwa index ref.fabwa mem ref.fa reads.fq aln-se.sambwa mem ref.fa read1.fq read2.fq aln-pe.sambwa aln ref.fa short_read.fq aln_sa.saibwa samse ref.fa aln_sa.sai short_read.fq aln-se.sambwa sampe ref.fa aln_sa1.sai aln_sa2.sai read1.fq read2.fq aln-pe.sambwa bwasw ref.fa long_re