与细菌有关的生物数据库.ppt

EcoCyc E. coli K-12 genome, metabolic pathways, transporters, and gene regulation networks. / SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data The SILVA (from Latin silva, forest) databases provides comprehensive, quality checked and regularly updated databases of aligned small- (16S/18S, SSU) and large subunit (23S/28S, LSU) ribosomal RNA (rRNA) sequences for all three domains of life (Bacteria, Archaea and Eukarya). All sequences are checked for anomalies, carry a rich set of sequence associated contextual information, have multiple taxonomic classifications, and the latest validly described nomenclature. http://www.arb-silva.de  Metagrowth Growth requirements of bacterial pathogens rs-mrs.fr/axenic/ Defensins Knowledgebase Antimicrobial peptides of the defensin family .sg/  你只闻到我的香水，却没看到我的汗水。 你否定我的现在，我决定我的未来！ 你嘲笑我一无所有，不配去爱，我可怜你总是等待。 你可以轻视我们的年轻，我们会证明这是谁的时代。 梦想是注定孤独的旅行，路上少不了质疑和嘲笑， 但那又怎样？ 哪怕遍体鳞伤，也要活得漂亮！ 你只闻到我的香水，却没看到我的汗水。 你否定我的现在，我决定我的未来！ 你嘲笑我一无所有，不配去爱，我可怜你总是等待。 你可以轻视我们的年轻，我们会证明这是谁的时代。 梦想是注定孤独的旅行，路上少不了质疑和嘲笑， 但那又怎样？ 哪怕遍体鳞伤，也要活得漂亮！ * atlas [?tl?s] 操纵子分析 DOOR Predicted operons in bacterial and archaeal genomes /OperonDB/  OperonDB Predicted operons in bacterial and archaeal genomes /cgi-bin/operons/help.cgi ODB - Operon database Operon database http://www.genome.sk.ritsumei.ac.jp/odb/  蛋白功能预测 OMPdb Beta-barrel outer membrane proteins from Gram-negative bacteria http://bioinformatics.biol.uoa.gr/OMPdb  PSORTdb  Protein subcellular localization in bacteria / HEG-DB Predicted highly expressed genes in prokaryotic genomes http://genomes.urv.cat/HEG-DB COG - Clusters of Orthologous Groups of proteins Protein families from complete microbial genomes /COG 2DProteome database system for microbial research http://www.mpiib-berlin.mpg.de/2D NRSub Bacillus subtilis genome http://pbil.univ-lyon1.fr/nrsub/nrsub.html P2CS Prokaryotic 2-Component Systems  P2CS is an integrated and comprehensive datab