《序列数据相似性查询技术研究综述_朱扬勇》.pdfVIP

ISSN 1000-1239 CN 11-1777 TP Journal of Computer Research and Development 7(2):26 -276, 2010 朱扬勇　戴东波　熊　赟 (　　200 33) (daidongbo@) A Survey of the Research on Similarity Query Technique of Sequence Data Zhu Yangyong, Dai Dongbo, and Xiong Yun (School of Comp uter S cience, Fudan University, Shanghai 200 33) Abstract　Sequence data is ubiquitous in many domains such as text, Web access log and biological database.Similarity query in sequence data is a very important means for extracting useful information.Recently, w ith the development of various scientific computing and the generation of large scale sequence data, similarity query on sequence data is becoming a hot research topic.Some important issues related to it are:similarity metrics used in different application fields and the mutual connections betw een them;statistical information of distance distribution on random sequence collections as w ell as its function for analyzing the performance of query algorithms;different kinds of key techniques for efficiently answ ering similarity queries in large scale datasets and the comparisons betw een their merits and demerits.In this survey, the classification and characteristics of sequence data is summarized.Some kinds of similarity metrics and statistical information about distance betw een random sequences are also presented and the relationships among these similarity metrics are further analyzed.T hen, some types of similarity query and key issues in point are introduced.Based on these foundations, this paper focuses on the classification and evaluation of key techniques on sequence similarity search.Finally, some challenges on similarity query of sequence data are discussed and future research trends are also summarized. Key words 　sequence data;similarity metric;distance distribution;filtering technique;