Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions 英文参考文献.docVIP

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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions 英文参考文献.doc

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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions 英文参考文献

Open Access Re 2009CarreraetVoal.lumesea10,rchIssue 9, Article R96 Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions ¤ ¤ Javier Carrera *?, Guillermo Rodrigo *, Alfonso Jaramillo?§ and Santiago F Elena*? Addresses: *Instituto de Biología Molecular y Celular de Plantas, Consejo Superior de Investigaciones Científicas-UPV, Ingeniero Fausto Elio s/n, 46022 València, Spain. ?ITACA, Universidad Politécnica de Valencia, Ingeniero Fausto Elio s/n, 46022 València, Spain. ?Laboratoire de Biochimie, école-Polytechnique-CNRS UMR7654, Route de Saclay, 91128 Palaiseau, France. §Epigenomics Project, Genopole-Université dévry Val dEssonne-CNRS UPS3201, 523 Terrasses de lAgora, 91034 évry, France. ?The Santa Fe Institute, Hyde Park Road, Santa Fe, NM 87501, USA. ¤ These authors contributed equally to this work. Correspondence: Santiago F Elena. Email: sfelena@ibmcp.upv.es Published: 15 September 2009 Received: 10 July 2009 Revised: 1 September 2009 Accepted: 15 September 2009 Genome Biology 2009, 10:R96 (doi:10.1186/gb-2009-10-9-r96) The electronic version of this article is the complete one and can be found online at /2009/10/9/R96 ? 2009 Carrera et al.; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. ConnectivityppAn Arabidinoptranscriptionalsis thaliana tranetworksnscriptional network reveals regulatory mechanisms for the control of genes related to stress adaptation./ Abstract Background: Understanding the molecular mechanisms plants have evolved to adapt their biological activities to a constantly changing environment is an intriguing question and one that requires a systems biology approach. Here we present a network analysis of genome-wide