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Apple miRNAs and tasiRNAs with novel regulatory networks
Xiaetal.GenomeBiology2012,13:R47
/2012/13/6/R47
RESEARCH
OpenAccess
ApplemiRNAsandtasiRNAswithnovel
regulatorynetworks
RuiXia1,2,3,HongZhu2,3,Yong-qiangAn4,EricPBeers2andZongrangLiu2,3*
Abstract
Background:MicroRNAs(miRNAs)andtheirregulatoryfunctionshavebeenextensivelycharacterizedinmodel
speciesbutwhetherapplehasevolvedsimilaroruniqueregulatoryfeaturesremainsunknown.
Results:WeperformeddeepsmallRNA-seqandidentified23conserved,10less-conservedand42apple-specific
miRNAsorfamilieswithdistinctexpressionpatterns.TheidentifiedmiRNAstarget118genesrepresentingawide
rangeofenzymaticandregulatoryacti
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