a novel microrna and transcription factor mediated regulatory network in schizophrenia一种新颖的微rna在精神分裂症和转录因子介导的监管网络.pdfVIP
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a novel microrna and transcription factor mediated regulatory network in schizophrenia一种新颖的微rna在精神分裂症和转录因子介导的监管网络
Guo et al. BMC Systems Biology 2010, 4:10
/1752-0509/4/10
RESEARCH ARTICLE Open Access
A Novel microRNA and transcription factor
mediated regulatory network in schizophrenia
1 1,2 1,2 1,2,3*
An-Yuan Guo , Jingchun Sun , Peilin Jia , Zhongming Zhao
Abstract
Background: Schizophrenia is a complex brain disorder with molecular mechanisms that have yet to be
elucidated. Previous studies have suggested that changes in gene expression may play an important role in the
etiology of schizophrenia, and that microRNAs (miRNAs) and transcription factors (TFs) are primary regulators of
this gene expression. So far, several miRNA-TF mediated regulatory modules have been verified. We hypothesized
that miRNAs and TFs might play combinatory regulatory roles for schizophrenia genes and, thus, explored miRNA-
TF regulatory networks in schizophrenia.
Results: We identified 32 feed-forward loops (FFLs) among our compiled schizophrenia-related miRNAs, TFs and
genes. Our evaluation revealed that these observed FFLs were significantly enriched in schizophrenia genes. By
converging the FFLs and mutual feedback loops, we constructed a novel miRNA-TF regulatory network for
schizophrenia. Our analysis revealed EGR3 and hsa-miR-195 were core regulators in this regulatory network. We
next proposed a model highlighting EGR3 and miRNAs involved in signaling pathways and regulatory networks in
the nervous system. Finally, we suggested several single nucleotide polymorphisms (SNPs) located on miRNAs, their
target sites, and TFBSs, which may have an effect in schizophrenia gene regulation.
Conclusions: This study provides many insights on the regulatory mechanisms of genes involved in schizophrenia.
It represents the first investigation of a miRNA-TF regulatory networ
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