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a perl package and an alignment tool for phylogenetic networks一个perl包和一个对齐工具系统网络
BMC Bioinformatics BioMed Central
Software Open Access
A perl package and an alignment tool for phylogenetic networks
1 1 2
Gabriel Cardona* , Francesc Rosselló and Gabriel Valiente
Address: 1Department of Mathematics and Computer Science, University of the Balearic Islands, E-07122 Palma de Mallorca, Spain and
2Algorithms, Bioinformatics, Complexity and Formal Methods Research Group, Technical University of Catalonia, E-08034 Barcelona, Spain
Email: Gabriel Cardona* - gabriel.cardona@uib.es; Francesc Rosselló - cesc.rossello@uib.es; Gabriel Valiente - valiente@
* Corresponding author
Published: 27 March 2008 Received: 20 November 2007
Accepted: 27 March 2008
BMC Bioinformatics 2008, 9:175 doi:10.1186/1471-2105-9-175
This article is available from: /1471-2105/9/175
© 2008 Cardona et al; licensee BioMed Central Ltd.
This is an Open Access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0),
which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Abstract
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the
representation of evolutionary events acting at the population level, like recombination between
genes, hybridization between lineages, and lateral gene transfer. While most phylogenetics tools
implement a wide range of algorithms on phylogeneti
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